CoSMoS - Conserved Sequence Motif Search Jakob Lab
Motif SearchAdvanced Motif SearchProtein InfoAbout CoSMoSCoSMoS Help

Searching CoSMoS for regular expression :^([A-Z]{0,20})(C)([A-Z]{2})(C)...
The sequence motif was found in 64 proteins
Localizing motifs and retrieving alignment data.......
Ordering motifs by conservation and preparing output using weighing string nWNW ...

RefSeq ID Gene NameAlignment Protein info AA Seq. Index Conservation Score Identical Amino Acids Matching Amino Acids Comp. to Seq. at Pos. Comp. to Seq. in Aln.
16129846 insA_5alignment protein info C8295.5 / 95% 295295298 311
P 9 294 294 298
S 10 238 238 298
C 11 296 296 299
16131316 insA_6alignment protein info C8295.5 / 95% 295295298 311
P 9 294 294 298
S 10 238 238 298
C 11 296 296 299
16128016 insA_1alignment protein info C8295.5 / 95% 295295298 311
P 9 294 294 298
S 10 238 238 298
C 11 296 296 299
49176117 ydeMalignment protein info C21807 / 94.3% 809809828 856
D 22 45 45 827
Y 23 473 473 828
C 24 805 805 818
16128260 insA_3alignment protein info C8295 / 95.2% 295295298 310
P 9 294 294 298
S 10 238 238 298
C 11 295 295 298
16128250 insA_2alignment protein info C8295 / 95.2% 295295298 310
P 9 294 294 298
S 10 238 238 298
C 11 295 295 298
16130856 yggWalignment protein info C20907 / 92.3% 907907964 983
P 21 115 115 964
Y 22 553 553 967
C 23 907 907 967
16132115 insA_7alignment protein info C8293 / 95.1% 293293296 308
P 9 292 292 296
S 10 238 238 296
C 11 293 293 296
16129547 ynfGalignment protein info C17588.5 / 86.5% 583583633 680
K 18 139 139 630
T 19 186 186 627
C 20 594 594 638
16129188 narHalignment protein info C19573.5 / 85% 575575633 675
H 20 135 135 633
T 21 129 129 534
C 22 572 572 630
16128862 dmsBalignment protein info C17587 / 84.9% 586586653 691
K 18 134 134 654
T 19 187 187 653
C 20 588 588 656
16128817 grxAalignment protein info C11256.5 / 92.6% 272272275 277
P 12 237 237 275
Y 13 174 174 274
C 14 241 241 274
16131444 yiaIalignment protein info C15613 / 84.4% 608608682 726
R 16 108 108 684
T 17 195 195 677
C 18 618 618 680
16130487 yfhLalignment protein info C12227.5 / 96% 223223234 237
D 13 81 81 234
M 14 32 32 234
C 15 232 232 234
16129426 narYalignment protein info C19580 / 83.8% 568568640 692
H 20 134 134 634
T 21 180 180 651
C 22 592 592 651
16130587 nrdHalignment protein info C11220.5 / 95.9% 221221221 230
V 12 35 35 221
Q 13 50 50 221
C 14 220 220 221
16130631 hycBalignment protein info C15648.5 / 83.6% 647647720 776
H 16 151 151 720
T 17 55 55 274
C 18 650 650 731
16128398 ybaDalignment protein info C3190 / 89.2% 193193199 213
P 4 187 187 199
F 5 117 117 199
C 6 187 187 199
16131934 phnAalignment protein info C6105.5 / 83.1% 106106106 127
P 7 92 92 110
K 8 55 55 110
C 9 105 105 110
16130620 hydNalignment protein info C15646 / 81.4% 649649744 794
R 16 114 114 743
T 17 203 203 744
C 18 643 643 746
49176055 hcpalignment protein info C582.5 / 84.2% 717194 98
V 6 17 17 94
Q 7 82 82 94
C 8 94 94 94
16128884 ycaRalignment protein info C1185.5 / 77% 108108111 111
P 12 109 109 111
V 13 38 38 111
C 14 63 63 111
16128094 yacGalignment protein info C964 / 98.5% 646464 65
P 10 63 63 64
T 11 33 33 64
C 12 64 64 64
16131481 grxCalignment protein info C12471 / 76.1% 583583593 619
P 13 273 273 592
Y 14 216 216 613
C 15 359 359 613
49176280 ygfSalignment protein info C16596 / 73% 616616773 816
R 17 99 99 773
T 18 190 190 763
C 19 576 576 654
16130178 glpCalignment protein info C12559 / 69.4% 528528698 805
T 13 32 32 697
V 14 27 27 695
C 15 590 590 695
16129027 grxBalignment protein info C937.5 / 62.5% 353559 60
P 10 43 43 59
Y 11 21 21 59
C 12 40 40 59
16131905 fdhFalignment protein info C8606 / 56% 549549927 1082
P 9 208 208 946
Y 10 207 207 951
C 11 663 663 950
16130022 ogrKalignment protein info C432 / 100% 323232 32
P 5 31 31 32
L 6 13 13 32
C 7 32 32 32
16128917 pqiAalignment protein info C1353 / 51% 535353 104
S 14 6 6 53
Q 15 21 21 53
C 16 53 53 53
16130033 gatZalignment protein info C1723.5 / 57.3% 111140 41
S 18 27 27 40
V 19 34 34 40
C 20 36 36 40
16128273 ykgJalignment protein info C1019 / 79.2% 191920 24
G 11 19 19 20
A 12 19 19 20
C 13 19 19 20
16128827 ybjFalignment protein info C11269.5 / 21.9% 266266565 1229
R 12 23 23 577
S 13 35 35 573
C 14 273 273 530
16132206 smsalignment protein info C11230.5 / 17.9% 235235897 1291
N 12 106 106 905
E 13 139 139 907
C 14 226 226 863
16128468 copAalignment protein info C14326.5 / 17% 351351540 1925
G 15 86 86 467
H 16 59 59 511
C 17 302 302 514
16130435 yfgJalignment protein info C1715 / 100% 151515 15
P 18 15 15 15
Q 19 1 1 15
C 20 15 15 15
16131366 yhiOalignment protein info C1215 / 75% 151520 20
V 13 16 16 20
V 14 19 19 20
C 15 15 15 20
16130634 hypBalignment protein info C247.5 / 16.4% 484865 290
T 3 24 24 75
T 4 25 25 73
C 5 47 47 75
16128035 fixAalignment protein info C1837.5 / 14.6% 6666236 256
Y 19 18 18 237
K 20 223 223 237
C 21 9 9 239
16131178 rpmJalignment protein info C1113 / 100% 131313 13
R 12 2 2 13
N 13 0 0 13
C 14 13 13 13
49176493 yjiValignment protein info C2112 / 80% 121212 15
N 22 3 3 12
D 23 1 1 12
C 24 12 12 12
49176335 yrdDalignment protein info C1532 / 11.1% 3232274 288
P 16 31 31 274
K 17 16 16 274
C 18 32 32 274
16130917 ygiTalignment protein info C310 / 28.6% 101013 35
P 4 10 10 12
V 5 6 6 12
C 6 10 10 12
16128423 clpXalignment protein info C15258.5 / 10.3% 2632632015 2499
S 16 368 368 2011
F 17 287 287 1073
C 18 254 254 1936
16129295 fnralignment protein info C2076.5 / 5.8% 7777771 1320
Q 21 47 47 790
D 22 70 70 823
C 23 76 76 837
16130309 yfdYalignment protein info C115 / 55.6% 559 9
I 12 9 9 9
V 13 5 5 9
C 14 5 5 9
49176453 plsBalignment protein info C45 / 3.4% 5513 149
Y 5 5 5 13
P 6 7 7 14
C 7 5 5 15
16131035 yraIalignment protein info C148.5 / 3.3% 1111239 255
S 15 31 31 238
F 16 19 19 238
C 17 6 6 237
16128669 speFalignment protein info C126 / 2.7% 55110 222
P 13 8 8 45
D 14 7 7 110
C 15 7 7 110
49176198 yfaTalignment protein info C194.5 / 40.9% 558 11
W 20 5 5 8
L 21 10 10 11
C 22 4 4 11
16130507 trxCalignment protein info C536 / 2% 5050487 1814
T 6 26 26 483
H 7 13 13 485
C 8 22 22 480
16131809 b3975alignment protein info C123 / 100% 333 3
I 13 3 3 3
I 14 3 3 3
C 15 3 3 3
16129309 laralignment protein info C93 / 100% 333 3
P 10 3 3 3
F 11 3 3 3
C 12 3 3 3
16130270 yfcRalignment protein info C193 / 9.7% 6620 31
S 20 3 3 25
V 21 3 3 25
C 22 0 0 31
16130411 hyfFalignment protein info C2136.5 / 1.5% 47472213 2499
F 22 67 67 1346
A 23 168 168 2084
C 24 26 26 2068
16129776 rrmAalignment protein info C533 / 1.3% 2828366 2472
P 6 50 50 382
L 7 70 70 386
C 8 38 38 404
16129156 mltEalignment protein info C165 / 0.8% 55286 602
I 17 10 10 288
S 18 21 21 293
C 19 5 5 254
16130789 ygfTalignment protein info C2018 / 0.7% 181868 2499
H 21 14 14 68
A 22 16 16 68
C 23 18 18 68
16130393 aegAalignment protein info C1518 / 0.7% 181821 2499
H 16 14 14 21
A 17 14 14 21
C 18 18 18 21
16128129 yadKalignment protein info C212 / 14.3% 4414 14
I 22 0 0 14
A 23 4 4 14
C 24 0 0 14
16128203 yafTalignment protein info C71 / 100% 111 1
C 8 1 1 1
I 9 1 1 1
C 10 1 1 1
49176014 yaiLalignment protein info C41 / 2.9% 222 35
L 5 2 2 2
T 6 2 2 2
C 7 0 0 2
16130908 yqhCalignment protein info C146.5 / 0.3% 6641 2499
S 15 9 9 41
L 16 9 9 39
C 17 7 7 39
49176111 yncBalignment protein info C63 / 0.1% 2296 2499
D 7 7 7 92
G 8 10 10 96
C 9 4 4 99